U.S. Geological Survey and the California State Water Resources Control Board
Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Two small watersheds of the Fresno and San Joaquin Rivers in the Central Sierra Nevada constitute one of the study units being evaluated.
The Central Sierra Nevada Study Unit Overview of Water Quality


Organic Inorganic constituents constituents
GAMA’s Priority Basin Project evaluates the quality of untreated groundwater. However, for context, benchmarks established for drinkingwater quality are used for comparison. Benchmarks and definitions of high, moderate, and low concentrations are discussed in the inset box on page 3.
Many inorganic constituents occur naturally in groundwater. The concentrations of the inorganic constituents can be affected by natural processes as well as by human activities. In the Central Sierra Nevada study unit, one or more inorganic constituents were present at high concentrations in about 41% of the primary aquifers and at moderate concentrations in 36%.
Human-made organic constituents are found in products used in the home, business, industry, and agriculture. Organic constituents can enter the environment through normal usage, spills, or improper disposal. In this study unit, organic constituents were not present at high concentrations in the primary aquifers, and were present at moderate concentrations in about 4%.
RESULTS: Groundwater Quality in the Central Sierra Nevada Study Unit
INORGANIC CONSTITUENTS
Radioactive constituents
Manganese
INORGANIC CONSTITUENTS SPECIAL-INTEREST CONSTITUENTS Trace elements
Perchlorate
Total dissolved solids Inorganic Constituents with Human-Health Benchmarks
Trace and minor elements are naturally present in the minerals in rocks and soils, and in the water that comes into contact with those materials. In the Central Sierra Nevada study unit, trace elements were present at high concentrations in about 25% of the primary aquifers, and in moderate concentrations in about 32%. Arsenic, molybdenum, and fluoride were the trace elements that most frequently occurred at high and moderate concentrations. Chromium and selenium also were detected at high concentrations, but in less than (<) 1% of the primary aquifers.
Radioactivity is the emission of energy or particles during spontaneous decay of unstable atoms. Humans are exposed to small amounts of natural radioactivity every day. Most of the radioactivity in groundwater comes from decay of naturally-occurring isotopes of uranium and thorium in minerals in the rocks or sediments of the aquifers. Radioactive constituents occurred at high levels in about 31% of the primary aquifers, and at moderate levels in about 26%. Gross alpha particle activity, and uranium were the radioactive constituents that most frequently occurred at high and moderate levels.
Nutrients, such as nitrogen and phosphorous, are naturally present at low concentrations in groundwater. High and moderate concentrations generally occur as a result of human activities. Common sources of nutrients include fertilizer applied to crops and landscaping, seepage from septic systems, and human and animal waste. In the Central Sierra Nevada study unit, nutrients were not detected at high concentrations in the primary aquifers, and were present at moderate concentration in about 3%.
Inorganic Constituents with Non-Health Benchmarks
(Not included in water-quality overview charts shown on the front page)
Some constituents affect the aesthetic properties of water, such as taste, color, and odor, or may create nuisance problems, such as staining and scaling. The State of California has a recommended and an upper limit for total dissolved solids (TDS) in drinking water. All water naturally contains TDS as a result of the weathering and dissolving of minerals in soils and rocks. Iron and manganese are naturally-occurring constituents that commonly occur together in groundwater. Anoxic conditions in groundwater (very low amounts of dissolved oxygen) may result in release of manganese and iron from minerals into groundwater.
In the Central Sierra Nevada study unit, TDS were present at high concentrations (greater than the upper limit) in about 2% of the primary aquifers, and at moderate concentrations (between the upper and recommended limits) in about 3%. Manganese, with or without iron, was present at high concentrations in about 32% of the primary aquifers, and at moderate concentrations in about 9% of the primary aquifers.
Perchlorate
(Not included in water-quality overview charts shown on the front page)
Perchlorate is an inorganic constituent that has been regulated in California drinking water since 2007. It is an ingredient in rocket fuel, fireworks, safety flares, and other products, may be present in some fertilizers, and occurs naturally at low concentrations in groundwater. Perchlorate was not detected in the primary aquifers.
RESULTS: Groundwater Quality in the Central Sierra Nevada Study Unit
ORGANIC CONSTITUENTS
Gasoline additives and oxygenates
BENCHMARKS FOR EVALUATING GROUNDWATER QUALITY
GAMA’s Priority Basin Project uses benchmarks established for drinking water to provide context for evaluating the quality of untreated groundwater. After withdrawal, groundwater may be disinfected, filtered, mixed, and exposed to the atmosphere before being delivered to consumers. Federal and California regulatory benchmarks for protecting human health (Maximum Contaminant Level, MCL) were used when available. Nonregulatory benchmarks for protecting aesthetic properties, such as taste and odor (Secondary Maximum Contaminant Level, SMCL), and nonregulatory benchmarks for protecting human health (Notification Level, NL, and Lifetime Health Advisory, HAL) were used when Federal or California regulatory benchmarks were not available.
High, moderate, and low concentrations are defined relative to benchmarks
Concentrations are considered high if they are greater than a benchmark. For inorganic constituents, concentrations are moderate if they are greater than one-half of a benchmark. For organic constituents and perchlorate, concentrations are moderate if they are greater than one-tenth of a benchmark; this lower threshold was used because organic constituents are generally less prevalent and have smaller concentrations relative to benchmarks than inorganic constituents. Low values include nondetections and values less than moderate concentrations. Methods for evaluating water quality are discussed in Fram and Belitz (2012).
Organic Constituents
The Priority Basin Project uses laboratory methods that can detect the presence of low concentrations of volatile organic compounds (VOCs) and pesticides, far below human-health benchmarks. VOCs and pesticides detected at these very low concentrations can be used to help trace water from the landscape into the aquifer system.
Volatile Organic Compounds with Human-Health Benchmarks
VOCs are in many household, commercial, industrial, and agricultural products, and are characterized by their tendency to volatilize (evaporate) into the air.
Gasoline additives and oxygenates are used to increase the efficiency of fuel combustion. In the Central Sierra Nevada study unit, gasoline additives and oxygenates were not present at high concentrations, but were detected at moderate concentrations in about 4% of the primary aquifers, and at low concentrations (or not detected) in about 96%.
Other VOCs include trihalomethanes, solvents, refrigerants, and organic synthesis reagents. Trihalomethanes form during disinfection of water supplies, and may enter groundwater by the infiltration of landscape irrigation water, the leaking of distribution lines, or the disinfection of wells. Solvents are used for a number of purposes, including manufacturing and cleaning. Other VOCs were not detected at high or moderate concentrations in the primary aquifers. Trihalomethanes and solvents, when detected, were at low concentrations.
Pesticides with Human-Health Benchmarks
Pesticides, including herbicides, insecticides, fungicides, and fumigants, are applied to crops, gardens, lawns, around buildings, and along roads to help control unwanted vegetation (weeds), insects, fungi, and other pests. In the Central Sierra Nevada study unit, pesticides were not detected at high or moderate concentrations in the primary aquifers. Herbicides occasionally were detected at low concentrations.

Factors that Affect Groundwater Quality Priority Basin Assessments
GAMA’s Priority Basin Project (PBP) assesses water quality in that part of the aquifer system used for drinking water, primarily public supply. Water quality in the primary aquifers, assessed by the PBP, may differ from that in the deeper parts of the aquifer, or from the shallower parts, which are being assessed by GAMA’s Domestic Well Project. Ongoing assessments are being conducted in more than 120 basins throughout California.
The PBP assessments are based on a comparison of constituent concentrations in untreated groundwater with benchmarks established for protection of human health and for aesthetic concerns. The PBP does not evaluate the quality of drinking water delivered to consumers.
The PBP uses two scientific approaches for assessing groundwater quality. The first approach uses a network of wells to statistically assess the status of groundwater quality. The second approach combines water-quality, hydrologic, geographic, and other data to help assess the factors that affect water quality. In the Central Sierra Nevada study unit, data were collected by the PBP in 2006, and from the CDPH database for 2003–2006. The PBP includes chemical analyses generally not available as part of regulatory compliance monitoring, including measurements at concentrations much lower than human-health benchmarks, and measurement of constituents that can be used to trace the sources and movement of groundwater.

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